Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rbm28Q8CGC6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Gm43125-201ENSMUST00000201724 730 ntBASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rbm28Q8CGC6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Gm18057-201ENSMUST00000208220 503 ntBASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rbm28Q8CGC6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.6■□□□□ 0.41
Rbm28Q8CGC6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rbm28Q8CGC6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.58■□□□□ 0.41
Rbm28Q8CGC6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms