Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc22Q8C5N3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Cwc22Q8C5N3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc22Q8C5N3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc22Q8C5N3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc22Q8C5N3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm37935-201ENSMUST00000192012 982 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm2213-201ENSMUST00000197485 688 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm2451-201ENSMUST00000199447 999 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm10290-201ENSMUST00000200451 999 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cwc22Q8C5N3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Gm27397-201ENSMUST00000184997 107 ntBASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Olfr286-202ENSMUST00000205305 969 ntBASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Sybu-209ENSMUST00000228639 4113 ntBASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cwc22Q8C5N3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Gm18737-201ENSMUST00000173594 937 ntBASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cwc22Q8C5N3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Gm11543-201ENSMUST00000120758 370 ntBASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.47■□□□□ 0.87
Cwc22Q8C5N3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms