Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cps1Q8C196 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cps1Q8C196 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cps1Q8C196 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cps1Q8C196 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Gm12390-201ENSMUST00000117897 397 ntBASIC19.76■□□□□ 0.75
Cps1Q8C196 Gm15240-201ENSMUST00000118156 720 ntBASIC19.76■□□□□ 0.75
Cps1Q8C196 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.76■□□□□ 0.75
Cps1Q8C196 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC19.76■□□□□ 0.75
Cps1Q8C196 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 AC150560.1-201ENSMUST00000227731 1187 ntBASIC19.76■□□□□ 0.75
Cps1Q8C196 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cps1Q8C196 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cps1Q8C196 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.75■□□□□ 0.75
Cps1Q8C196 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Cps1Q8C196 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 AC131068.2-201ENSMUST00000226175 1453 ntBASIC19.75■□□□□ 0.75
Cps1Q8C196 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.75■□□□□ 0.75
Cps1Q8C196 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cps1Q8C196 Gm13226-201ENSMUST00000117838 404 ntBASIC19.75■□□□□ 0.75
Cps1Q8C196 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.75■□□□□ 0.75
Cps1Q8C196 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.75■□□□□ 0.75
Cps1Q8C196 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cps1Q8C196 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19.74■□□□□ 0.75
Cps1Q8C196 Gm27839-201ENSMUST00000184242 106 ntBASIC19.74■□□□□ 0.75
Cps1Q8C196 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cps1Q8C196 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cps1Q8C196 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cps1Q8C196 Gm15957-201ENSMUST00000118893 974 ntBASIC19.73■□□□□ 0.75
Cps1Q8C196 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cps1Q8C196 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.73■□□□□ 0.75
Cps1Q8C196 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cps1Q8C196 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cps1Q8C196 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cps1Q8C196 Gm12882-201ENSMUST00000121696 517 ntBASIC19.72■□□□□ 0.75
Cps1Q8C196 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.72■□□□□ 0.75
Cps1Q8C196 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cps1Q8C196 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.72■□□□□ 0.75
Cps1Q8C196 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cps1Q8C196 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cps1Q8C196 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cps1Q8C196 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cps1Q8C196 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Cps1Q8C196 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cps1Q8C196 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.72■□□□□ 0.75
Cps1Q8C196 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm27892-201ENSMUST00000185017 106 ntBASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm21470-201ENSMUST00000187680 696 ntBASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Cps1Q8C196 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Gm17795-201ENSMUST00000214505 757 ntBASIC19.71■□□□□ 0.75
Cps1Q8C196 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cps1Q8C196 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms