Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ppp4r4Q8C0Y0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm14140-201ENSMUST00000119999 995 ntBASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Psmb5-202ENSMUST00000227257 622 ntBASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ppp4r4Q8C0Y0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ppp4r4Q8C0Y0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ppp4r4Q8C0Y0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ppp4r4Q8C0Y0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ppp4r4Q8C0Y0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms