Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.69■□□□□ 0.26
Fam43aQ8BUP8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 App-207ENSMUST00000227737 2827 ntBASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm15372-201ENSMUST00000120729 834 ntBASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.68■□□□□ 0.26
Fam43aQ8BUP8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fam43aQ8BUP8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Fam43aQ8BUP8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms