Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Gm16198-201ENSMUST00000118766 670 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Gm9727-201ENSMUST00000161387 555 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Thap2-203ENSMUST00000218989 527 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp43Q8BUM9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp43Q8BUM9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
Usp43Q8BUM9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Usp43Q8BUM9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.08■□□□□ 0
Usp43Q8BUM9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.08■□□□□ 0
Usp43Q8BUM9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.08■□□□□ 0
Usp43Q8BUM9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.08■□□□□ 0
Usp43Q8BUM9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.08■□□□□ 0
Usp43Q8BUM9 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.08■□□□□ 0
Usp43Q8BUM9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.08■□□□□ 0
Usp43Q8BUM9 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.08■□□□□ 0
Usp43Q8BUM9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp43Q8BUM9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.07■□□□□ 0
Usp43Q8BUM9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Gm17968-201ENSMUST00000194902 784 ntBASIC15.07■□□□□ 0
Usp43Q8BUM9 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.07■□□□□ 0
Usp43Q8BUM9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.07■□□□□ 0
Usp43Q8BUM9 Gm10154-201ENSMUST00000084445 354 ntBASIC15.07■□□□□ 0
Usp43Q8BUM9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp43Q8BUM9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp43Q8BUM9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
Usp43Q8BUM9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Usp43Q8BUM9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Gm16026-204ENSMUST00000162652 683 ntBASIC15.06■□□□□ 0
Usp43Q8BUM9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.06■□□□□ 0
Usp43Q8BUM9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp43Q8BUM9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms