Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Rnf38Q8BI21 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Gm34391-201ENSMUST00000203706 907 ntBASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf38Q8BI21 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf38Q8BI21 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf38Q8BI21 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Rnf38Q8BI21 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms