Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx4Q7TNK1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx4Q7TNK1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx4Q7TNK1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Gm8318-201ENSMUST00000182954 872 ntBASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Mir6982-201ENSMUST00000184354 68 ntBASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx4Q7TNK1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Rprl3-201ENSMUST00000157400 290 ntBASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx4Q7TNK1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx4Q7TNK1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx4Q7TNK1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms