Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Gm8602-201ENSMUST00000184045 607 ntBASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 App-207ENSMUST00000227737 2827 ntBASIC16.88■□□□□ 0.29
Ddx55Q6ZPL9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm8749-201ENSMUST00000117737 331 ntBASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Mir7085-201ENSMUST00000184353 66 ntBASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm28760-201ENSMUST00000185995 736 ntBASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm18624-201ENSMUST00000220966 658 ntBASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Gm9797-201ENSMUST00000052902 613 ntBASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx55Q6ZPL9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Gm44719-201ENSMUST00000206404 149 ntBASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx55Q6ZPL9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx55Q6ZPL9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms