Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc44a1Q6X893 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc44a1Q6X893 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Rprl2-201ENSMUST00000157150 290 ntBASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc44a1Q6X893 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Gm13365-201ENSMUST00000121188 973 ntBASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a1Q6X893 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Gm6736-201ENSMUST00000166583 948 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Gm9726-201ENSMUST00000180321 678 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Gm27920-201ENSMUST00000183953 96 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Chchd1-203ENSMUST00000224633 557 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a1Q6X893 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms