Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Gm11543-201ENSMUST00000120758 370 ntBASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Npc1l1Q6T3U4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Npc1l1Q6T3U4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Npc1l1Q6T3U4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Npc1l1Q6T3U4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Npc1l1Q6T3U4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Npc1l1Q6T3U4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Gm12428-201ENSMUST00000119844 727 ntBASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Npc1l1Q6T3U4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Npc1l1Q6T3U4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Npc1l1Q6T3U4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms