Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rif1Q6PR54 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.52□□□□□ -0.4
Rif1Q6PR54 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Gm27631-201ENSMUST00000184163 466 ntBASIC12.52□□□□□ -0.4
Rif1Q6PR54 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rif1Q6PR54 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Gm10766-202ENSMUST00000194123 606 ntBASIC12.52□□□□□ -0.41
Rif1Q6PR54 Gm5363-201ENSMUST00000211927 938 ntBASIC12.52□□□□□ -0.41
Rif1Q6PR54 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rif1Q6PR54 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gm5523-201ENSMUST00000180415 997 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gm27486-201ENSMUST00000184923 80 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gm12997-201ENSMUST00000120207 640 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Gm10012-201ENSMUST00000078252 192 ntBASIC12.51□□□□□ -0.41
Rif1Q6PR54 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rif1Q6PR54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Mir877-201ENSMUST00000104738 85 ntBASIC12.5□□□□□ -0.41
Rif1Q6PR54 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Mir7654-201ENSMUST00000185082 70 ntBASIC12.5□□□□□ -0.41
Rif1Q6PR54 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rif1Q6PR54 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms