Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd3Q6P9Z1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Gm12644-201ENSMUST00000119935 606 ntBASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Gm12134-201ENSMUST00000122109 520 ntBASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd3Q6P9Z1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd3Q6P9Z1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd3Q6P9Z1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.69□□□□□ -0.22
Smarcd3Q6P9Z1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms