Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smchd1Q6P5D8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Dupd1-202ENSMUST00000224735 548 ntBASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smchd1Q6P5D8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Gm14057-201ENSMUST00000120631 482 ntBASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Gm23547-201ENSMUST00000158210 271 ntBASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Gm5186-201ENSMUST00000218781 920 ntBASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smchd1Q6P5D8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm27533-201ENSMUST00000183800 152 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm8410-201ENSMUST00000117225 605 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm9719-201ENSMUST00000162765 543 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Olfr286-202ENSMUST00000205305 969 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm45098-201ENSMUST00000207179 657 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Gm2423-201ENSMUST00000074863 733 ntBASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smchd1Q6P5D8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smchd1Q6P5D8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms