Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.84■□□□□ 0.61
Clcn1Q64347 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Clcn1Q64347 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn1Q64347 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn1Q64347 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Clcn1Q64347 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.83■□□□□ 0.61
Clcn1Q64347 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn1Q64347 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn1Q64347 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.83■□□□□ 0.6
Clcn1Q64347 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Gm16215-201ENSMUST00000161990 637 ntBASIC18.83■□□□□ 0.6
Clcn1Q64347 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Clcn1Q64347 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn1Q64347 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Gm13823-201ENSMUST00000119930 345 ntBASIC18.82■□□□□ 0.6
Clcn1Q64347 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.82■□□□□ 0.6
Clcn1Q64347 Mir7684-201ENSMUST00000183858 60 ntBASIC18.82■□□□□ 0.6
Clcn1Q64347 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.82■□□□□ 0.6
Clcn1Q64347 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.82■□□□□ 0.6
Clcn1Q64347 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn1Q64347 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.81■□□□□ 0.6
Clcn1Q64347 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn1Q64347 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clcn1Q64347 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.81■□□□□ 0.6
Clcn1Q64347 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clcn1Q64347 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Clcn1Q64347 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clcn1Q64347 Gm44855-201ENSMUST00000205725 362 ntBASIC18.81■□□□□ 0.6
Clcn1Q64347 Gm7730-201ENSMUST00000212486 454 ntBASIC18.81■□□□□ 0.6
Clcn1Q64347 Gm7775-201ENSMUST00000218871 853 ntBASIC18.81■□□□□ 0.6
Clcn1Q64347 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms