Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.09□□□□□ -0.47
Col7a1Q63870 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Gm6334-201ENSMUST00000207083 228 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Gm5425-201ENSMUST00000214125 459 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col7a1Q63870 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.09□□□□□ -0.47
Col7a1Q63870 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col7a1Q63870 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col7a1Q63870 Gm4909-201ENSMUST00000118749 794 ntBASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm4804-201ENSMUST00000182234 999 ntBASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.08□□□□□ -0.48
Col7a1Q63870 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.08□□□□□ -0.48
Col7a1Q63870 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.08□□□□□ -0.48
Col7a1Q63870 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col7a1Q63870 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm38671-201ENSMUST00000200573 130 ntBASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm17795-201ENSMUST00000214505 757 ntBASIC12.08□□□□□ -0.48
Col7a1Q63870 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col7a1Q63870 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col7a1Q63870 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm37230-201ENSMUST00000194491 818 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm45186-201ENSMUST00000206874 478 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col7a1Q63870 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.07□□□□□ -0.48
Col7a1Q63870 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm6621-201ENSMUST00000193251 772 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.07□□□□□ -0.48
Col7a1Q63870 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col7a1Q63870 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm24255-201ENSMUST00000104481 128 ntBASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.06□□□□□ -0.48
Col7a1Q63870 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.06□□□□□ -0.48
Col7a1Q63870 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Gm8099-201ENSMUST00000200510 742 ntBASIC12.06□□□□□ -0.48
Col7a1Q63870 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col7a1Q63870 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms