Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ndufa4Q62425 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.82□□□□□ -0.68
Ndufa4Q62425 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm7889-201ENSMUST00000185591 958 ntBASIC10.82□□□□□ -0.68
Ndufa4Q62425 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ndufa4Q62425 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.81□□□□□ -0.68
Ndufa4Q62425 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Gm15039-201ENSMUST00000118914 875 ntBASIC10.81□□□□□ -0.68
Ndufa4Q62425 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.81□□□□□ -0.68
Ndufa4Q62425 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.81□□□□□ -0.68
Ndufa4Q62425 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.81□□□□□ -0.68
Ndufa4Q62425 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ndufa4Q62425 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ndufa4Q62425 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms