Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcanQ62059 Dancr-204ENSMUST00000132389 2347 ntBASIC13.8□□□□□ -0.2
VcanQ62059 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
VcanQ62059 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.79□□□□□ -0.2
VcanQ62059 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
VcanQ62059 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.79□□□□□ -0.2
VcanQ62059 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VcanQ62059 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.79□□□□□ -0.2
VcanQ62059 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VcanQ62059 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VcanQ62059 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.79□□□□□ -0.2
VcanQ62059 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VcanQ62059 Gm26083-201ENSMUST00000157904 193 ntBASIC13.79□□□□□ -0.2
VcanQ62059 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.79□□□□□ -0.2
VcanQ62059 Gm5161-201ENSMUST00000075243 853 ntBASIC13.79□□□□□ -0.2
VcanQ62059 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VcanQ62059 Gm6013-201ENSMUST00000212264 699 ntBASIC13.78□□□□□ -0.2
VcanQ62059 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VcanQ62059 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.78□□□□□ -0.2
VcanQ62059 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 Gm7783-201ENSMUST00000204795 781 ntBASIC13.78□□□□□ -0.2
VcanQ62059 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VcanQ62059 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VcanQ62059 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.77□□□□□ -0.2
VcanQ62059 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcanQ62059 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
VcanQ62059 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
VcanQ62059 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcanQ62059 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcanQ62059 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcanQ62059 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VcanQ62059 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.77□□□□□ -0.2
VcanQ62059 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Mir1894-201ENSMUST00000122802 81 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Nsd1-205ENSMUST00000224693 852 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Gm10012-201ENSMUST00000078252 192 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VcanQ62059 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Gm11814-201ENSMUST00000119515 929 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.77□□□□□ -0.21
VcanQ62059 Gm38158-201ENSMUST00000194617 339 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Gm19184-201ENSMUST00000196798 928 ntBASIC13.77□□□□□ -0.21
VcanQ62059 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VcanQ62059 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.77□□□□□ -0.21
VcanQ62059 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.77□□□□□ -0.21
VcanQ62059 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms