Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.56■□□□□ 0.4
Ctr9Q62018 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.56■□□□□ 0.4
Ctr9Q62018 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm15483-201ENSMUST00000120338 456 ntBASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Ctr9Q62018 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.56■□□□□ 0.4
Ctr9Q62018 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.56■□□□□ 0.4
Ctr9Q62018 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.56■□□□□ 0.4
Ctr9Q62018 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ctr9Q62018 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ctr9Q62018 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctr9Q62018 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.55■□□□□ 0.4
Ctr9Q62018 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctr9Q62018 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.55■□□□□ 0.4
Ctr9Q62018 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Ctr9Q62018 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.55■□□□□ 0.4
Ctr9Q62018 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ctr9Q62018 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ctr9Q62018 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.54■□□□□ 0.4
Ctr9Q62018 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.54■□□□□ 0.4
Ctr9Q62018 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Gm43125-201ENSMUST00000201724 730 ntBASIC17.54■□□□□ 0.4
Ctr9Q62018 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.54■□□□□ 0.4
Ctr9Q62018 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Ctr9Q62018 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ctr9Q62018 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ctr9Q62018 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ctr9Q62018 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms