Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.12□□□□□ -0.31
DhhQ61488 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
DhhQ61488 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.12□□□□□ -0.31
DhhQ61488 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.12□□□□□ -0.31
DhhQ61488 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.12□□□□□ -0.31
DhhQ61488 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.12□□□□□ -0.31
DhhQ61488 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.12□□□□□ -0.31
DhhQ61488 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.12□□□□□ -0.31
DhhQ61488 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
DhhQ61488 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
DhhQ61488 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.12□□□□□ -0.31
DhhQ61488 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DhhQ61488 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DhhQ61488 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.11□□□□□ -0.31
DhhQ61488 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DhhQ61488 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
DhhQ61488 Gm12008-201ENSMUST00000117791 755 ntBASIC13.11□□□□□ -0.31
DhhQ61488 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.11□□□□□ -0.31
DhhQ61488 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.11□□□□□ -0.31
DhhQ61488 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
DhhQ61488 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.11□□□□□ -0.31
DhhQ61488 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.11□□□□□ -0.31
DhhQ61488 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.11□□□□□ -0.31
DhhQ61488 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.11□□□□□ -0.31
DhhQ61488 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DhhQ61488 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.1□□□□□ -0.31
DhhQ61488 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.1□□□□□ -0.31
DhhQ61488 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.1□□□□□ -0.31
DhhQ61488 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.1□□□□□ -0.31
DhhQ61488 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.1□□□□□ -0.31
DhhQ61488 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.1□□□□□ -0.31
DhhQ61488 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
DhhQ61488 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
DhhQ61488 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
DhhQ61488 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.1□□□□□ -0.31
DhhQ61488 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DhhQ61488 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DhhQ61488 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DhhQ61488 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DhhQ61488 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
DhhQ61488 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms