Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.78□□□□□ -0.36
Clns1aQ61189 Gm25406-201ENSMUST00000157599 105 ntBASIC12.78□□□□□ -0.36
Clns1aQ61189 Gm23547-201ENSMUST00000158210 271 ntBASIC12.78□□□□□ -0.36
Clns1aQ61189 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.78□□□□□ -0.36
Clns1aQ61189 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clns1aQ61189 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Clns1aQ61189 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clns1aQ61189 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Clns1aQ61189 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clns1aQ61189 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Clns1aQ61189 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clns1aQ61189 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.77□□□□□ -0.37
Clns1aQ61189 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Gm13559-201ENSMUST00000120476 863 ntBASIC12.77□□□□□ -0.37
Clns1aQ61189 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.77□□□□□ -0.37
Clns1aQ61189 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Clns1aQ61189 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.77□□□□□ -0.37
Clns1aQ61189 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clns1aQ61189 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clns1aQ61189 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
Clns1aQ61189 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Clns1aQ61189 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clns1aQ61189 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Clns1aQ61189 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.76□□□□□ -0.37
Clns1aQ61189 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.76□□□□□ -0.37
Clns1aQ61189 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.76□□□□□ -0.37
Clns1aQ61189 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clns1aQ61189 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clns1aQ61189 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms