Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scarb1Q61009 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scarb1Q61009 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scarb1Q61009 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.6□□□□□ -0.39
Scarb1Q61009 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Gm10013-201ENSMUST00000106074 672 ntBASIC12.6□□□□□ -0.39
Scarb1Q61009 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.6□□□□□ -0.39
Scarb1Q61009 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.6□□□□□ -0.39
Scarb1Q61009 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scarb1Q61009 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Scarb1Q61009 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scarb1Q61009 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scarb1Q61009 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.59□□□□□ -0.39
Scarb1Q61009 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.59□□□□□ -0.39
Scarb1Q61009 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.59□□□□□ -0.39
Scarb1Q61009 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scarb1Q61009 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.59□□□□□ -0.39
Scarb1Q61009 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Scarb1Q61009 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scarb1Q61009 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.58□□□□□ -0.4
Scarb1Q61009 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Gm13312-201ENSMUST00000119631 718 ntBASIC12.58□□□□□ -0.4
Scarb1Q61009 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Gm5587-201ENSMUST00000206270 674 ntBASIC12.58□□□□□ -0.4
Scarb1Q61009 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.58□□□□□ -0.4
Scarb1Q61009 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scarb1Q61009 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms