Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Mir6956-201ENSMUST00000183598 62 ntBASIC15.26■□□□□ 0.03
Slc6a4Q60857 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.26■□□□□ 0.03
Slc6a4Q60857 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.26■□□□□ 0.03
Slc6a4Q60857 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a4Q60857 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.25■□□□□ 0.03
Slc6a4Q60857 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Gm15920-201ENSMUST00000118998 402 ntBASIC15.25■□□□□ 0.03
Slc6a4Q60857 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.25■□□□□ 0.03
Slc6a4Q60857 Gm7774-201ENSMUST00000200064 533 ntBASIC15.25■□□□□ 0.03
Slc6a4Q60857 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc6a4Q60857 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.24■□□□□ 0.03
Slc6a4Q60857 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Gm5779-201ENSMUST00000218467 910 ntBASIC15.24■□□□□ 0.03
Slc6a4Q60857 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc6a4Q60857 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms