Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.22□□□□□ -0.13
Nr1h4Q60641 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nr1h4Q60641 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Grk6-207ENSMUST00000225925 2769 ntBASIC14.21□□□□□ -0.13
Nr1h4Q60641 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.21□□□□□ -0.13
Nr1h4Q60641 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nr1h4Q60641 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1h4Q60641 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nr1h4Q60641 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.21□□□□□ -0.14
Nr1h4Q60641 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Nr1h4Q60641 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nr1h4Q60641 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.2□□□□□ -0.14
Nr1h4Q60641 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.2□□□□□ -0.14
Nr1h4Q60641 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nr1h4Q60641 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nr1h4Q60641 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms