Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-2Q5R1I4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Gm14767-201ENSMUST00000121559 586 ntBASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Gm18766-201ENSMUST00000189811 808 ntBASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-2Q5R1I4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gm28630-201ENSMUST00000187806 498 ntBASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-2Q5R1I4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.05□□□□□ -0.32
Trav6-2Q5R1I4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms