Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5d-4Q5R1F6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5d-4Q5R1F6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Trav5d-4Q5R1F6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5d-4Q5R1F6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.83□□□□□ -0.35
Trav5d-4Q5R1F6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5d-4Q5R1F6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Gm4899-201ENSMUST00000178708 719 ntBASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Gm15590-201ENSMUST00000078419 552 ntBASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav5d-4Q5R1F6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5d-4Q5R1F6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms