Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav3-3Q5R1C3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav3-3Q5R1C3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav3-3Q5R1C3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gm10812-201ENSMUST00000099864 546 ntBASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav3-3Q5R1C3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-3Q5R1C3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms