Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Gm27989-201ENSMUST00000184721 107 ntBASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Gm45098-201ENSMUST00000207179 657 ntBASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg7Q3ULF4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Gm12151-201ENSMUST00000121374 290 ntBASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg7Q3ULF4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm12428-201ENSMUST00000119844 727 ntBASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm13823-201ENSMUST00000119930 345 ntBASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm14767-201ENSMUST00000121559 586 ntBASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg7Q3ULF4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Mir7684-201ENSMUST00000183858 60 ntBASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg7Q3ULF4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms