Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-3Q3UHX8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx6-3Q3UHX8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Gm14701-201ENSMUST00000117156 348 ntBASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Gm5312-201ENSMUST00000203728 547 ntBASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-3Q3UHX8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms