Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lins1Q3U1D0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lins1Q3U1D0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lins1Q3U1D0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Lins1Q3U1D0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Lins1Q3U1D0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.7■□□□□ 0.42
Lins1Q3U1D0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lins1Q3U1D0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lins1Q3U1D0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.69■□□□□ 0.42
Lins1Q3U1D0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.68■□□□□ 0.42
Lins1Q3U1D0 Gm27618-201ENSMUST00000183671 60 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms