Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fndc4Q3TR08 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm25745-201ENSMUST00000174945 133 ntBASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm10819-201ENSMUST00000099988 561 ntBASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Fndc4Q3TR08 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Gm12644-201ENSMUST00000119935 606 ntBASIC12.74□□□□□ -0.37
Fndc4Q3TR08 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fndc4Q3TR08 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Gm12497-201ENSMUST00000138778 237 ntBASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.73□□□□□ -0.37
Fndc4Q3TR08 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Fndc4Q3TR08 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms