Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43aQ3TL54 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim43aQ3TL54 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim43aQ3TL54 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim43aQ3TL54 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Trim43aQ3TL54 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trim43aQ3TL54 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Gm27867-201ENSMUST00000184778 125 ntBASIC15.82■□□□□ 0.12
Trim43aQ3TL54 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43aQ3TL54 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Gm8655-201ENSMUST00000221159 852 ntBASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43aQ3TL54 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms