Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.54□□□□□ -0.4
Npas1P97459 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Npas1P97459 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Npas1P97459 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.54□□□□□ -0.4
Npas1P97459 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.53□□□□□ -0.4
Npas1P97459 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.53□□□□□ -0.4
Npas1P97459 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Gm11355-201ENSMUST00000121120 306 ntBASIC12.53□□□□□ -0.4
Npas1P97459 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.53□□□□□ -0.4
Npas1P97459 Gm22697-201ENSMUST00000175194 63 ntBASIC12.53□□□□□ -0.4
Npas1P97459 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Npas1P97459 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.53□□□□□ -0.4
Npas1P97459 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.53□□□□□ -0.4
Npas1P97459 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Npas1P97459 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Npas1P97459 Grk6-207ENSMUST00000225925 2769 ntBASIC12.52□□□□□ -0.4
Npas1P97459 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Npas1P97459 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Npas1P97459 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.52□□□□□ -0.41
Npas1P97459 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.52□□□□□ -0.41
Npas1P97459 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Npas1P97459 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Npas1P97459 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Npas1P97459 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Npas1P97459 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Npas1P97459 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Npas1P97459 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Npas1P97459 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.51□□□□□ -0.41
Npas1P97459 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.51□□□□□ -0.41
Npas1P97459 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Npas1P97459 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Gm9987-201ENSMUST00000069768 567 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms