Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Gm8097-201ENSMUST00000117903 829 ntBASIC20.61■□□□□ 0.89
Stra8P70278 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.61■□□□□ 0.89
Stra8P70278 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.61■□□□□ 0.89
Stra8P70278 Gm18622-201ENSMUST00000219361 595 ntBASIC20.61■□□□□ 0.89
Stra8P70278 Gm8655-201ENSMUST00000221159 852 ntBASIC20.61■□□□□ 0.89
Stra8P70278 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Stra8P70278 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Stra8P70278 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Stra8P70278 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.6■□□□□ 0.89
Stra8P70278 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Stra8P70278 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Gm11452-201ENSMUST00000122376 690 ntBASIC20.6■□□□□ 0.89
Stra8P70278 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Stra8P70278 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.6■□□□□ 0.89
Stra8P70278 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Stra8P70278 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC20.6■□□□□ 0.89
Stra8P70278 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Stra8P70278 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Stra8P70278 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Stra8P70278 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.59■□□□□ 0.89
Stra8P70278 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.59■□□□□ 0.89
Stra8P70278 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.59■□□□□ 0.89
Stra8P70278 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.59■□□□□ 0.89
Stra8P70278 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Stra8P70278 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.58■□□□□ 0.89
Stra8P70278 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Stra8P70278 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Stra8P70278 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.58■□□□□ 0.89
Stra8P70278 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.58■□□□□ 0.89
Stra8P70278 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Stra8P70278 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Stra8P70278 Gm43509-201ENSMUST00000196551 2594 ntBASIC20.58■□□□□ 0.88
Stra8P70278 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Stra8P70278 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Stra8P70278 Ksr1-207ENSMUST00000226282 5260 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Stra8P70278 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Stra8P70278 Gm8242-201ENSMUST00000193029 1420 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44357-201ENSMUST00000195897 142 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm19658-201ENSMUST00000196231 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44367-201ENSMUST00000196836 138 ntBASIC20.57■□□□□ 0.88
Stra8P70278 Gm44350-201ENSMUST00000197197 138 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms