Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.36□□□□□ -0.11
Ythdf1P59326 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.36□□□□□ -0.11
Ythdf1P59326 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ythdf1P59326 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.35□□□□□ -0.11
Ythdf1P59326 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.35□□□□□ -0.11
Ythdf1P59326 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ythdf1P59326 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ythdf1P59326 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ythdf1P59326 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.34□□□□□ -0.11
Ythdf1P59326 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ythdf1P59326 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ythdf1P59326 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ythdf1P59326 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ythdf1P59326 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ythdf1P59326 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms