Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup43P59235 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.1□□□□□ -0.15
Nup43P59235 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.1□□□□□ -0.15
Nup43P59235 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.1□□□□□ -0.15
Nup43P59235 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup43P59235 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.1□□□□□ -0.15
Nup43P59235 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nup43P59235 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup43P59235 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup43P59235 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Nup43P59235 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nup43P59235 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.09□□□□□ -0.15
Nup43P59235 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup43P59235 Gm17271-201ENSMUST00000165535 355 ntBASIC14.09□□□□□ -0.15
Nup43P59235 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Gm27301-201ENSMUST00000184012 127 ntBASIC14.09□□□□□ -0.15
Nup43P59235 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.09□□□□□ -0.15
Nup43P59235 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup43P59235 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup43P59235 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup43P59235 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup43P59235 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nup43P59235 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup43P59235 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup43P59235 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup43P59235 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup43P59235 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.08□□□□□ -0.15
Nup43P59235 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup43P59235 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Nup43P59235 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup43P59235 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nup43P59235 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.08□□□□□ -0.16
Nup43P59235 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.07□□□□□ -0.16
Nup43P59235 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.07□□□□□ -0.16
Nup43P59235 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup43P59235 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup43P59235 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms