Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tpm1P58771 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tpm1P58771 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tpm1P58771 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tpm1P58771 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tpm1P58771 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.66■□□□□ 0.26
Tpm1P58771 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Tpm1P58771 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Tpm1P58771 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tpm1P58771 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Mir6982-201ENSMUST00000184354 68 ntBASIC16.66■□□□□ 0.26
Tpm1P58771 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.66■□□□□ 0.26
Tpm1P58771 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.66■□□□□ 0.26
Tpm1P58771 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.66■□□□□ 0.26
Tpm1P58771 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tpm1P58771 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.65■□□□□ 0.26
Tpm1P58771 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.65■□□□□ 0.26
Tpm1P58771 Gm15794-201ENSMUST00000120182 631 ntBASIC16.65■□□□□ 0.26
Tpm1P58771 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.65■□□□□ 0.26
Tpm1P58771 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Tpm1P58771 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.65■□□□□ 0.26
Tpm1P58771 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.65■□□□□ 0.26
Tpm1P58771 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Tpm1P58771 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.65■□□□□ 0.26
Tpm1P58771 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tpm1P58771 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Tpm1P58771 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tpm1P58771 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tpm1P58771 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tpm1P58771 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.64■□□□□ 0.25
Tpm1P58771 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.64■□□□□ 0.25
Tpm1P58771 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.64■□□□□ 0.25
Tpm1P58771 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Tpm1P58771 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.64■□□□□ 0.25
Tpm1P58771 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tpm1P58771 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.63■□□□□ 0.25
Tpm1P58771 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tpm1P58771 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms