Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.3■□□□□ 0.04
Pms2P54279 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.3■□□□□ 0.04
Pms2P54279 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.3■□□□□ 0.04
Pms2P54279 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pms2P54279 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.3■□□□□ 0.04
Pms2P54279 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.3■□□□□ 0.04
Pms2P54279 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.3■□□□□ 0.04
Pms2P54279 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.3■□□□□ 0.04
Pms2P54279 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pms2P54279 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.29■□□□□ 0.04
Pms2P54279 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pms2P54279 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.29■□□□□ 0.04
Pms2P54279 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.29■□□□□ 0.04
Pms2P54279 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Pms2P54279 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.29■□□□□ 0.04
Pms2P54279 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.29■□□□□ 0.04
Pms2P54279 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pms2P54279 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pms2P54279 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.28■□□□□ 0.04
Pms2P54279 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.28■□□□□ 0.04
Pms2P54279 Gm18489-201ENSMUST00000172565 551 ntBASIC15.28■□□□□ 0.04
Pms2P54279 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.28■□□□□ 0.04
Pms2P54279 Gm9682-201ENSMUST00000197505 556 ntBASIC15.28■□□□□ 0.04
Pms2P54279 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.28■□□□□ 0.04
Pms2P54279 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pms2P54279 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pms2P54279 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pms2P54279 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pms2P54279 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pms2P54279 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.28■□□□□ 0.04
Pms2P54279 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.27■□□□□ 0.04
Pms2P54279 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.27■□□□□ 0.04
Pms2P54279 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pms2P54279 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pms2P54279 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pms2P54279 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pms2P54279 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Gm24589-201ENSMUST00000116692 94 ntBASIC15.27■□□□□ 0.04
Pms2P54279 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pms2P54279 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.27■□□□□ 0.04
Pms2P54279 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms