Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.71■□□□□ 0.11
SftpdP50404 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.71■□□□□ 0.11
SftpdP50404 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpdP50404 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.71■□□□□ 0.11
SftpdP50404 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SftpdP50404 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpdP50404 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpdP50404 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.7■□□□□ 0.1
SftpdP50404 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.7■□□□□ 0.1
SftpdP50404 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Gm11779-201ENSMUST00000118541 368 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Gm16198-201ENSMUST00000118766 670 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.7■□□□□ 0.1
SftpdP50404 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
SftpdP50404 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.7■□□□□ 0.1
SftpdP50404 Gm27525-201ENSMUST00000184465 107 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Gm17968-201ENSMUST00000194902 784 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.7■□□□□ 0.1
SftpdP50404 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.7■□□□□ 0.1
SftpdP50404 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.7■□□□□ 0.1
SftpdP50404 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SftpdP50404 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpdP50404 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SftpdP50404 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SftpdP50404 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.69■□□□□ 0.1
SftpdP50404 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.69■□□□□ 0.1
SftpdP50404 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Gm15467-201ENSMUST00000120582 445 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Mir8117-201ENSMUST00000184773 107 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Gm43514-201ENSMUST00000198852 424 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
SftpdP50404 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Gm10154-201ENSMUST00000084445 354 ntBASIC15.69■□□□□ 0.1
SftpdP50404 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpdP50404 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SftpdP50404 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Mir3113-201ENSMUST00000175478 76 ntBASIC15.68■□□□□ 0.1
SftpdP50404 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.68■□□□□ 0.1
SftpdP50404 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.68■□□□□ 0.1
SftpdP50404 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.68■□□□□ 0.1
SftpdP50404 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.68■□□□□ 0.1
SftpdP50404 Gm45747-201ENSMUST00000212203 999 ntBASIC15.68■□□□□ 0.1
SftpdP50404 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpdP50404 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms