Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ercc3P49135 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.7■□□□□ 0.42
Ercc3P49135 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.7■□□□□ 0.42
Ercc3P49135 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.7■□□□□ 0.42
Ercc3P49135 Gm37935-201ENSMUST00000192012 982 ntBASIC17.7■□□□□ 0.42
Ercc3P49135 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ercc3P49135 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ercc3P49135 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.7■□□□□ 0.42
Ercc3P49135 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc3P49135 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ercc3P49135 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ercc3P49135 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.69■□□□□ 0.42
Ercc3P49135 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ercc3P49135 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.69■□□□□ 0.42
Ercc3P49135 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc3P49135 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.68■□□□□ 0.42
Ercc3P49135 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Gm20553-201ENSMUST00000204205 844 ntBASIC17.68■□□□□ 0.42
Ercc3P49135 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.68■□□□□ 0.42
Ercc3P49135 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Ercc3P49135 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ercc3P49135 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ercc3P49135 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ercc3P49135 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc3P49135 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.67■□□□□ 0.42
Ercc3P49135 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ercc3P49135 Gm17271-201ENSMUST00000165535 355 ntBASIC17.67■□□□□ 0.42
Ercc3P49135 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.67■□□□□ 0.42
Ercc3P49135 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc3P49135 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms