Protein–RNA interactions for Protein: P48787

Tnni3, Troponin I, cardiac muscle, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnni3P48787 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnni3P48787 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnni3P48787 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.32■□□□□ 0.2
Tnni3P48787 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnni3P48787 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnni3P48787 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tnni3P48787 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnni3P48787 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.32■□□□□ 0.2
Tnni3P48787 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.32■□□□□ 0.2
Tnni3P48787 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.32■□□□□ 0.2
Tnni3P48787 Gm5312-201ENSMUST00000203728 547 ntBASIC16.32■□□□□ 0.2
Tnni3P48787 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.32■□□□□ 0.2
Tnni3P48787 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Tnni3P48787 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tnni3P48787 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnni3P48787 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Tnni3P48787 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnni3P48787 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Gm43474-201ENSMUST00000196415 774 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Gm43125-201ENSMUST00000201724 730 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnni3P48787 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnni3P48787 Asic1-205ENSMUST00000228185 1818 ntBASIC16.31■□□□□ 0.2
Tnni3P48787 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnni3P48787 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Tnni3P48787 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.3■□□□□ 0.2
Tnni3P48787 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnni3P48787 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnni3P48787 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnni3P48787 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnni3P48787 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnni3P48787 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.3■□□□□ 0.2
Tnni3P48787 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnni3P48787 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnni3P48787 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnni3P48787 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms