Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm24752-201ENSMUST00000178240 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm24496-201ENSMUST00000178287 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm25649-201ENSMUST00000178476 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm25548-201ENSMUST00000178681 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm23147-201ENSMUST00000178841 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm26095-201ENSMUST00000179270 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm22171-201ENSMUST00000179283 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm23936-201ENSMUST00000179354 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm22619-201ENSMUST00000179516 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm25255-201ENSMUST00000179579 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm24755-201ENSMUST00000179691 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm26506-201ENSMUST00000179692 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm25086-201ENSMUST00000179931 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm23243-201ENSMUST00000180047 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm24659-201ENSMUST00000180212 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm24169-201ENSMUST00000180244 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm23689-201ENSMUST00000180354 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm27359-201ENSMUST00000184153 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm27785-201ENSMUST00000184268 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm27466-201ENSMUST00000184396 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm27703-201ENSMUST00000184836 110 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.43□□□□□ -0.42
Abca1P41233 Gm18057-201ENSMUST00000208220 503 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Abca1P41233 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.43□□□□□ -0.42
Abca1P41233 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Abca1P41233 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Abca1P41233 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.43□□□□□ -0.42
Abca1P41233 Gm17837-201ENSMUST00000186435 985 ntBASIC12.42□□□□□ -0.42
Abca1P41233 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.42□□□□□ -0.42
Abca1P41233 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Abca1P41233 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Abca1P41233 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Abca1P41233 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Abca1P41233 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Abca1P41233 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.42□□□□□ -0.42
Abca1P41233 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Abca1P41233 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Abca1P41233 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Abca1P41233 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.41□□□□□ -0.42
Abca1P41233 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Abca1P41233 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.41□□□□□ -0.42
Abca1P41233 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Abca1P41233 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.41□□□□□ -0.42
Abca1P41233 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.41□□□□□ -0.42
Abca1P41233 Gm5779-201ENSMUST00000218467 910 ntBASIC12.41□□□□□ -0.42
Abca1P41233 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.41□□□□□ -0.42
Abca1P41233 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Abca1P41233 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Abca1P41233 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Abca1P41233 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms