Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sftpa1P35242 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sftpa1P35242 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sftpa1P35242 Gm8515-201ENSMUST00000194852 576 ntBASIC13.73□□□□□ -0.21
Sftpa1P35242 Gm43703-201ENSMUST00000200523 763 ntBASIC13.73□□□□□ -0.21
Sftpa1P35242 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Gm9908-201ENSMUST00000211534 448 ntBASIC13.73□□□□□ -0.21
Sftpa1P35242 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sftpa1P35242 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sftpa1P35242 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Gm12091-201ENSMUST00000146791 830 ntBASIC13.72□□□□□ -0.21
Sftpa1P35242 Gm28631-201ENSMUST00000190740 334 ntBASIC13.72□□□□□ -0.21
Sftpa1P35242 Gm42612-201ENSMUST00000197986 623 ntBASIC13.72□□□□□ -0.21
Sftpa1P35242 Gm43170-201ENSMUST00000199827 612 ntBASIC13.72□□□□□ -0.21
Sftpa1P35242 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.72□□□□□ -0.21
Sftpa1P35242 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.72□□□□□ -0.21
Sftpa1P35242 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.72□□□□□ -0.21
Sftpa1P35242 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Sftpa1P35242 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sftpa1P35242 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.72□□□□□ -0.21
Sftpa1P35242 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sftpa1P35242 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm11478-201ENSMUST00000117851 599 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm46209-201ENSMUST00000217912 553 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Gm20445-201ENSMUST00000061905 565 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sftpa1P35242 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.71□□□□□ -0.21
Sftpa1P35242 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sftpa1P35242 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms