Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc11P31313 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc11P31313 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.45□□□□□ -0.1
Hoxc11P31313 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc11P31313 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.45□□□□□ -0.1
Hoxc11P31313 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc11P31313 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc11P31313 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc11P31313 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Hoxc11P31313 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.44□□□□□ -0.1
Hoxc11P31313 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Rpph1-201ENSMUST00000175096 319 ntBASIC14.44□□□□□ -0.1
Hoxc11P31313 Auts2-212ENSMUST00000178555 309 ntBASIC14.44□□□□□ -0.1
Hoxc11P31313 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxc11P31313 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc11P31313 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc11P31313 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxc11P31313 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc11P31313 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm16198-201ENSMUST00000118766 670 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm11745-201ENSMUST00000121669 448 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Rprl2-201ENSMUST00000157150 290 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm10576-201ENSMUST00000191927 825 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm44872-201ENSMUST00000207864 420 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.43□□□□□ -0.1
Hoxc11P31313 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms