Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pde6aP27664 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.28■□□□□ 0.36
Pde6aP27664 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.28■□□□□ 0.36
Pde6aP27664 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pde6aP27664 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Pde6aP27664 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6aP27664 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
Pde6aP27664 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pde6aP27664 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pde6aP27664 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pde6aP27664 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.27■□□□□ 0.36
Pde6aP27664 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.27■□□□□ 0.36
Pde6aP27664 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.27■□□□□ 0.36
Pde6aP27664 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.27■□□□□ 0.36
Pde6aP27664 Gm15483-201ENSMUST00000120338 456 ntBASIC17.27■□□□□ 0.36
Pde6aP27664 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.27■□□□□ 0.36
Pde6aP27664 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.27■□□□□ 0.36
Pde6aP27664 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.27■□□□□ 0.36
Pde6aP27664 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pde6aP27664 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pde6aP27664 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6aP27664 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.27■□□□□ 0.35
Pde6aP27664 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6aP27664 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6aP27664 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pde6aP27664 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.27■□□□□ 0.35
Pde6aP27664 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pde6aP27664 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.26■□□□□ 0.35
Pde6aP27664 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm13464-201ENSMUST00000119418 935 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm14822-201ENSMUST00000122247 291 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.26■□□□□ 0.35
Pde6aP27664 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.26■□□□□ 0.35
Pde6aP27664 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pde6aP27664 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Carlr-201ENSMUST00000181515 2574 ntBASIC17.26■□□□□ 0.35
Pde6aP27664 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6aP27664 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pde6aP27664 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.25■□□□□ 0.35
Pde6aP27664 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pde6aP27664 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.25■□□□□ 0.35
Pde6aP27664 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6aP27664 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms