Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.32■□□□□ 0.04
Nfkb1P25799 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.32■□□□□ 0.04
Nfkb1P25799 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.32■□□□□ 0.04
Nfkb1P25799 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nfkb1P25799 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Celf4-206ENSMUST00000224553 1729 ntBASIC15.31■□□□□ 0.04
Nfkb1P25799 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Gm24158-201ENSMUST00000175263 71 ntBASIC15.31■□□□□ 0.04
Nfkb1P25799 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Gm10253-201ENSMUST00000194270 940 ntBASIC15.31■□□□□ 0.04
Nfkb1P25799 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nfkb1P25799 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nfkb1P25799 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.3■□□□□ 0.04
Nfkb1P25799 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm25287-201ENSMUST00000103846 110 ntBASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm22918-201ENSMUST00000103855 110 ntBASIC15.3■□□□□ 0.04
Nfkb1P25799 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm11543-201ENSMUST00000120758 370 ntBASIC15.3■□□□□ 0.04
Nfkb1P25799 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm22175-201ENSMUST00000175007 78 ntBASIC15.3■□□□□ 0.04
Nfkb1P25799 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nfkb1P25799 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nfkb1P25799 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms