Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.46□□□□□ -0.42
Col8a2P25318 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col8a2P25318 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col8a2P25318 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col8a2P25318 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col8a2P25318 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.46□□□□□ -0.42
Col8a2P25318 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
Col8a2P25318 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col8a2P25318 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 Gm16026-204ENSMUST00000162652 683 ntBASIC12.45□□□□□ -0.42
Col8a2P25318 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.45□□□□□ -0.42
Col8a2P25318 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col8a2P25318 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.45□□□□□ -0.42
Col8a2P25318 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Col8a2P25318 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col8a2P25318 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.44□□□□□ -0.42
Col8a2P25318 Gm6973-201ENSMUST00000117080 721 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Mir1895-201ENSMUST00000122615 79 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col8a2P25318 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Mir6990-201ENSMUST00000183724 91 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.44□□□□□ -0.42
Col8a2P25318 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.44□□□□□ -0.42
Col8a2P25318 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.44□□□□□ -0.42
Col8a2P25318 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Col8a2P25318 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.44□□□□□ -0.42
Col8a2P25318 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col8a2P25318 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Col8a2P25318 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.44□□□□□ -0.42
Col8a2P25318 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col8a2P25318 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.43□□□□□ -0.42
Col8a2P25318 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col8a2P25318 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col8a2P25318 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms