Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Kcna1P16388 Gm18057-201ENSMUST00000208220 503 ntBASIC16.92■□□□□ 0.3
Kcna1P16388 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.92■□□□□ 0.3
Kcna1P16388 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Kcna1P16388 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.91■□□□□ 0.3
Kcna1P16388 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Rprl2-201ENSMUST00000157150 290 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.91■□□□□ 0.3
Kcna1P16388 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.91■□□□□ 0.3
Kcna1P16388 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.91■□□□□ 0.3
Kcna1P16388 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Kcna1P16388 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Kcna1P16388 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.9■□□□□ 0.3
Kcna1P16388 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.9■□□□□ 0.3
Kcna1P16388 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.9■□□□□ 0.3
Kcna1P16388 Mir6990-201ENSMUST00000183724 91 ntBASIC16.9■□□□□ 0.3
Kcna1P16388 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.9■□□□□ 0.3
Kcna1P16388 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Kcna1P16388 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Kcna1P16388 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Kcna1P16388 Sybu-209ENSMUST00000228639 4113 ntBASIC16.9■□□□□ 0.3
Kcna1P16388 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Kcna1P16388 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Kcna1P16388 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Kcna1P16388 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Kcna1P16388 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.89■□□□□ 0.29
Kcna1P16388 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Kcna1P16388 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.89■□□□□ 0.29
Kcna1P16388 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.89■□□□□ 0.29
Kcna1P16388 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.89■□□□□ 0.29
Kcna1P16388 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Kcna1P16388 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.89■□□□□ 0.29
Kcna1P16388 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Kcna1P16388 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Kcna1P16388 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Kcna1P16388 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.88■□□□□ 0.29
Kcna1P16388 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.88■□□□□ 0.29
Kcna1P16388 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.88■□□□□ 0.29
Kcna1P16388 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.88■□□□□ 0.29
Kcna1P16388 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Kcna1P16388 Gm43474-201ENSMUST00000196415 774 ntBASIC16.88■□□□□ 0.29
Kcna1P16388 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.88■□□□□ 0.29
Kcna1P16388 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms