Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Gm24589-201ENSMUST00000116692 94 ntBASIC14.43□□□□□ -0.1
Fv4P11370 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Gm6550-201ENSMUST00000187574 993 ntBASIC14.43□□□□□ -0.1
Fv4P11370 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.43□□□□□ -0.1
Fv4P11370 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.43□□□□□ -0.1
Fv4P11370 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Fv4P11370 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.42□□□□□ -0.1
Fv4P11370 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Fv4P11370 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Fv4P11370 Gm15173-201ENSMUST00000122049 433 ntBASIC14.42□□□□□ -0.1
Fv4P11370 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Fv4P11370 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Fv4P11370 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Fv4P11370 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Fv4P11370 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Fv4P11370 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Gm45167-201ENSMUST00000208007 322 ntBASIC14.41□□□□□ -0.1
Fv4P11370 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Fv4P11370 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Fv4P11370 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.41□□□□□ -0.1
Fv4P11370 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Fv4P11370 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Fv4P11370 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.4□□□□□ -0.1
Fv4P11370 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Gm7862-201ENSMUST00000121461 292 ntBASIC14.4□□□□□ -0.1
Fv4P11370 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.4□□□□□ -0.1
Fv4P11370 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fv4P11370 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms