Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13□□□□□ -0.33
UbbP0CG49 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13□□□□□ -0.33
UbbP0CG49 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13□□□□□ -0.33
UbbP0CG49 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13□□□□□ -0.33
UbbP0CG49 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UbbP0CG49 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
UbbP0CG49 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.99□□□□□ -0.33
UbbP0CG49 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UbbP0CG49 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Gm15358-201ENSMUST00000119249 520 ntBASIC12.99□□□□□ -0.33
UbbP0CG49 Olfr129-201ENSMUST00000122318 993 ntBASIC12.99□□□□□ -0.33
UbbP0CG49 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.99□□□□□ -0.33
UbbP0CG49 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.99□□□□□ -0.33
UbbP0CG49 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UbbP0CG49 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UbbP0CG49 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
UbbP0CG49 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UbbP0CG49 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.98□□□□□ -0.33
UbbP0CG49 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UbbP0CG49 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.98□□□□□ -0.33
UbbP0CG49 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.98□□□□□ -0.33
UbbP0CG49 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.98□□□□□ -0.33
UbbP0CG49 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.98□□□□□ -0.33
UbbP0CG49 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.98□□□□□ -0.33
UbbP0CG49 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.98□□□□□ -0.33
UbbP0CG49 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
UbbP0CG49 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UbbP0CG49 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UbbP0CG49 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UbbP0CG49 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UbbP0CG49 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UbbP0CG49 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms